Using the CVMFS na62fw Installation 
From version v0.9.0 up, the NA62 software framework is available on PPE machines via CVMFS. No Git checkout or compilation is necessary in order to run simulation or reconstruction - the code is compiled by the developers and can be found in 
/cvmfs/na62.cern.ch/offline/NA62FW/prod/.
 Set up na62fw 
We are using version 
v0.9.1 in this example, but this should be valid for future production versions as well.
Assuming you are on a CVMFS-enabled machine, in your preferred work directory (say 
~/work),
cd 
mkdir -p work/
cd work
setup your NA62FW with the commands
/cvmfs/na62.cern.ch/offline/NA62FW/prod/v0.9.1/NA62FWBuildRunTree.py -v v0.9.1 -w ~/work/v0.9.1
cd v0.9.1
source envv0.9.1.sh
This will create two new subdirectories, NA62MC and NA62Reconstruction. 
NA62AnalysisBuilder.py will be added to your 
PATH and NA62Reco can be run from the NA62Reconstruction directory.
 Running MC 
Assuming you've set up your framework as above, and you are in 
~/work/v0.9.1, configure GTK with
cd NA62MC/
chmod u+x config/GTK_RunCond.sh
config/GTK_RunCond.sh 3809
then run the simulation with
NA62MC macros/StandardRun.mac
This example will produce 1000 events in a file named 
pluto.root located in the current directory. To simulate other physics channels, create your own macro using the 
StandardRun.mac example.
 Running Reconstruction 
First we go to the NA62Reconstruction directory and we adapt our SAV and LKr configurations for MC data type
cd ../NA62Reconstruction
cat config/NA62Reconstruction.2015.conf | sed 's|\(RecoSeq.*\)SAV|\1|' > config/NA62Reconstruction.conf
mv -v config/LKr.2015.conf config/LKr.2015.conf.orig
cat config/LKr.2015.conf.orig | sed 's|^DataType =.*|DataType = mc|' | sed 's|^RefShapeFileName=.*|RefShapeFileName= config/LKr-refshape_mc.dat|' | sed 's|^DigFilterFileName=.*|DigFilterFileName= config/LKr-digfcons_mc.dat|' > config/LKr.2015.conf
Note that you can modify the reconstruction configuration by hand, simply by editing the files 
config/NA62Reconstruction.conf and 
config/LKr.2015.conf (see 
differences here ).
Then reconstruct the MC file produced in the previous step with
./NA62Reco -i ../NA62MC/pluto.root -o reco.root
This will produce a file named 
reco.root located in the current directory.
 Running Analysis 
To run the analysis, you will have to use the usual recipe for downloading NA62Analysis and setting up UserAnalysis.