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META TOPICPARENT |
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EUTelescope And ITK Testbeam pages |
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There are five basic steps to run the reconstruction chain (i.e. to transform raw data into analysis ready data): converter, clustering, hitmaker, alignment and filter. Each task is performed using the jobsub command (exported when the build environment is set) and requires a configuration file to set basic steering parameters such as input file, output directories and beam energy. The basic execution format is |
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< < | > ./jobsub.py --config=CONFIGURATION_FILE [-o PARAMETER_NAME=VALUE ] TASK_NAME FILE_NUMBER |
> > | > jobsub --config=CONFIGURATION_FILE [-o PARAMETER_NAME=VALUE ] TASK_NAME FILE_NUMBER
Alternatively the syntax can be:
> jobsub -c CONFIGURATION_FILE [-o PARAMETER_NAME=VALUE ] TASK_NAME FILE_NUMBER |
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* Now you can proceed to run the reconstruction. Here is an example reconstruction chain: |
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< < | > ./jobsub.py --config=$EUTELESCOPE/jobsub/examples/datura-noDUT/config.cfg -csv $EUTELESCOPE/jobsub/examples/datura-noDUT/runlist.csv converter 97 > ./jobsub.py --config=$EUTELESCOPE/jobsub/examples/datura-noDUT/config.cfg -csv $EUTELESCOPE/jobsub/examples/datura-noDUT/runlist.csv clustering 97 > ./jobsub.py --config=$EUTELESCOPE/jobsub/examples/datura-noDUT/config.cfg -csv $EUTELESCOPE/jobsub/examples/datura-noDUT/runlist.csv hitmaker 97 > ./jobsub.py --config=$EUTELESCOPE/jobsub/examples/datura-noDUT/config.cfg -csv $EUTELESCOPE/jobsub/examples/datura-noDUT/runlist.csv align 97 > ./jobsub.py --config=$EUTELESCOPE/jobsub/examples/datura-noDUT/config.cfg -csv $EUTELESCOPE/jobsub/examples/datura-noDUT/runlist.csv fitter 97 For ease of running a bash script called run_file.sh is in /data/detdev01/FEI4_testbeam_construction/reconstruction which will run the chain for you. Please edit the parameters at the top of the file. |
> > | > jobsub --config=$EUTELESCOPE/jobsub/examples/datura-noDUT/config.cfg -csv $EUTELESCOPE/jobsub/examples/datura-noDUT/runlist.csv converter 97 > jobsub --config=$EUTELESCOPE/jobsub/examples/datura-noDUT/config.cfg -csv $EUTELESCOPE/jobsub/examples/datura-noDUT/runlist.csv clustering 97 > jobsub --config=$EUTELESCOPE/jobsub/examples/datura-noDUT/config.cfg -csv $EUTELESCOPE/jobsub/examples/datura-noDUT/runlist.csv hitmaker 97 > jobsub --config=$EUTELESCOPE/jobsub/examples/datura-noDUT/config.cfg -csv $EUTELESCOPE/jobsub/examples/datura-noDUT/runlist.csv align 97 > jobsub --config=$EUTELESCOPE/jobsub/examples/datura-noDUT/config.cfg -csv $EUTELESCOPE/jobsub/examples/datura-noDUT/runlist.csv fitter 97 For ease of running a bash script called run_file.sh is in /data/detdev01/FEI4_testbeam_construction/reconstruction which will run the chain for you. Please edit the parameters at the top of the file. |
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The output of each step should include a root file (only the first three are inspectable) and lcio files. The final output, "SOMERUN-tracking.root" is used as the input for analysis. |